scooby.utils.plotting

Functions

plot_coverage(ax, interval, y, title, ylim, color_map)
plot_bed(ax, bed, interval, title[, strand])
plot_line(ax, interval, y, title, ylim)
add_heatmap_to_axes(out, pos, values, color, title[, vmax])
plot_tracks(tracks, interval[, height, color_map, ...])

Module Contents

scooby.utils.plotting.plot_coverage(ax, interval, y, title, ylim, color_map)

scooby.utils.plotting.plot_bed(ax, bed, interval, title, strand=None)

scooby.utils.plotting.plot_line(ax, interval, y, title, ylim)

scooby.utils.plotting.add_heatmap_to_axes(out, pos, values, color, title, vmax=None)

scooby.utils.plotting.plot_tracks(tracks, interval, height=1.5, color_map={}, fig_title=None, save_name=None, annotation_plot=None, annotation_scale=5)